Microorganisms is a peer-reviewed open-access scientific journal that covers various areas of microbiological research, including microbial taxonomy, molecular biology, genetics, and ecology. It is published by MDPI and was established in 2013. The editor-in-chief is Nico Jehmlich (UFZ-Helmholtz Centre for Environmental Research).

The journal publishes original research articles, review articles, and short communications.

Abstracting and indexing The journal is abstracted and indexed in:

According to the Journal Citation Reports, the journal has a 2025 impact factor of 4.7.

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