Flückiger is a habitational surname for someone from a place near Bern in Switzerland called Flückingen. Notable people with the surname include:
Friedrich August Flückiger (1828–1894), Swiss pharmacist, chemist and botanist Hans Flückiger (born 1926), Swiss cyclist Marcel Flückiger (1929–2010), Swiss footballer Mathias Flückiger (born 1988), Swiss mountain bike racer Lukas Flückiger (born 1984), Swiss mountain bike racer Pierre-André Flückiger (born 1919), Swiss sports shooter Sylvia Flückiger-Bäni (born 1952), Swiss politician Yves Flückiger (born 1955), Swiss economist
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