Nijssen is a Dutch patronymic surname originating from the given name "Denijs" (Denis). People with this surname include:

Nijssen Han Nijssen (1935–2013), Dutch ichthyologist Sjir Nijssen (born 1938), Dutch computer scientist known for Nijssen's Information Analysis Method Tom Nijssen (born 1964), Dutch tennis player

Nyssen Hubert Nyssen (1925–2011), Belgian writer and publisher

See also De Nijs Nijs Nissen (surname)